Transcript: ENST00000507675.1 NUP155-006

Description

nucleoporin 155kDa [Source:HGNC Symbol;Acc:8063]

Gene Synonyms

KIAA0791, N155

Location

Chromosome 5: 37,363,990-37,371,205 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 4011 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000113569.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231498.3	NUP155-001	8143	1391aa	ENSP00000231498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3921	B3KMK3 B4DLT2 O75694	NM_153485.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381843.2	NUP155-004	4200	1332aa	ENSP00000371265.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43310	B3KMK3 O75694	NM_004298.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513532.1	NUP155-003	4088	1327aa	ENSP00000422019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64142	B3KMK3 E9PF10	NM_001278312.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507675.1	NUP155-006	673	54aa	ENSP00000423484.1	Nonsense mediated decay		D6RA13	-	-
ENST00000502533.1	NUP155-005	1896	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515054.1	NUP155-007	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508182.1	NUP155-008	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507233.1	NUP155-009	459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 673 bps, Translation length: 54 residues

Version

ENST00000507675.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367074 (version 1)

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Transcript: ENST00000507675.1 NUP155-006

Summary