Transcript: ENST00000504343.1 CNOT6-004

Description

CCR4-NOT transcription complex, subunit 6 [Source:HGNC Symbol;Acc:14099]

Gene Synonyms

CCR4, CCR4a, KIAA1194

Location

Chromosome 5: 179,956,275-179,994,968 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 19035 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000113300.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393356.1	CNOT6-001	6303	557aa	ENSP00000377024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4455	Q9ULM6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261951.4	CNOT6-201	6176	557aa	ENSP00000261951.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4455	Q9ULM6	NM_015455.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504343.1	CNOT6-004	706	234aa	ENSP00000422087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502447.1	CNOT6-003	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510148.1	CNOT6-006	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507016.1	CNOT6-005	382	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 706 bps, Translation length: 234 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000504343.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372550 (version 1)

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Transcript: ENST00000504343.1 CNOT6-004

Summary