Transcript: ENST00000508692.1 COL4A3BP-006

Description

collagen, type IV, alpha 3 (Goodpasture antigen) binding protein [Source:HGNC Symbol;Acc:2205]

Gene Synonyms

CERT, CERTL, GPBP, STARD11

Location

Chromosome 5: 74,669,788-74,681,748 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 5233 variant alleles and maps to 152 oligo probes.

Gene

This transcript is a product of gene ENSG00000113163.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380494.5	COL4A3BP-001	5651	752aa	ENSP00000369862.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47235	Q9Y5P4	NM_001130105.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405807.4	COL4A3BP-002	2843	624aa	ENSP00000383996.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4028	Q9Y5P4	NM_005713.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261415.7	COL4A3BP-003	2262	598aa	ENSP00000261415.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4029	Q9Y5P4	NM_031361.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357457.4	COL4A3BP-007	886	234aa	ENSP00000350046.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508809.1	COL4A3BP-005	693	126aa	ENSP00000424244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508692.1	COL4A3BP-006	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000604926.1	COL4A3BP-008	3355	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 508 bps,

Version

ENST00000508692.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000369122 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000508692.1 COL4A3BP-006

Summary