Transcript: ENST00000539554.1 MAGOHB-010

Description

mago-nashi homolog B (Drosophila) [Source:HGNC Symbol;Acc:25504]

Gene Synonyms

FLJ10292, MAGOH2, MGN2, mago, magoh

Location

Chromosome 12: 10,758,612-10,766,190 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 3801 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000111196.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320756.2	MAGOHB-001	800	148aa	ENSP00000319240.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8628	F5H6P7 Q96A72	NM_018048.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539554.1	MAGOHB-010	666	102aa	ENSP00000437462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6P7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381881.2	MAGOHB-201	660	111aa	ENSP00000371305.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NEC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544850.1	MAGOHB-002	1057	90aa	ENSP00000437512.1	Nonsense mediated decay		F5H3U9 F5H6N1	-	-
ENST00000545236.1	MAGOHB-005	868	81aa	ENSP00000439698.1	Nonsense mediated decay		F5H124	-	-
ENST00000543929.1	MAGOHB-007	841	81aa	ENSP00000442440.1	Nonsense mediated decay		F5H124	-	-
ENST00000540074.1	MAGOHB-009	705	44aa	ENSP00000439091.1	Nonsense mediated decay		F5H3U9	-	-
ENST00000546173.1	MAGOHB-006	576	81aa	ENSP00000437548.1	Nonsense mediated decay		F5H124	-	-
ENST00000537852.1	MAGOHB-003	2671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544176.1	MAGOHB-004	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000398874.4	MAGOHB-008	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 666 bps, Translation length: 102 residues

Version

ENST00000539554.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399613 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000539554.1 MAGOHB-010

Summary