Transcript: ENST00000533914.1 HTATIP2-008

Description

HIV-1 Tat interactive protein 2, 30kDa [Source:HGNC Symbol;Acc:16637]

Gene Synonyms

CC3, FLJ26963, SDR44U1, TIP30

Location

Chromosome 11: 20,397,563-20,405,324 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3242 variant alleles and maps to 338 oligo probes.

Gene

This transcript is a product of gene ENSG00000109854.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419348.2	HTATIP2-001	1477	276aa	ENSP00000392985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44553	Q9BUP3	NM_001098520.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451739.2	HTATIP2-002	1748	242aa	ENSP00000394259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7852	Q9BUP3	NM_001098522.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531058.1	HTATIP2-009	1060	196aa	ENSP00000436729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PI87	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443524.2	HTATIP2-003	967	242aa	ENSP00000387876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7852	Q9BUP3	NM_001098521.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421577.2	HTATIP2-004	886	242aa	ENSP00000397752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7852	Q9BUP3	NM_006410.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532081.1	HTATIP2-007	774	133aa	ENSP00000432107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53613	Q9BUP3	NM_001098523.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530266.1	HTATIP2-006	713	133aa	ENSP00000436548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53613	Q9BUP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532505.1	HTATIP2-005	595	133aa	ENSP00000432338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53613	Q9BUP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533914.1	HTATIP2-008	1562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,562 bps,

Version

ENST00000533914.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387448 (version 1)

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Transcript: ENST00000533914.1 HTATIP2-008

Summary