Transcript: ENST00000369774.4 SH3PXD2A-001

Description

SH3 and PX domains 2A [Source:HGNC Symbol;Acc:23664]

Gene Synonyms

FISH, KIAA0418, SH3MD1, TKS5

Location

Chromosome 10: 105,353,784-105,615,301 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 38 domains and features, is associated with 109221 variant alleles and maps to 857 oligo probes.

Gene

This transcript is a product of gene ENSG00000107957.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355946.2	SH3PXD2A-201	11245	1105aa	ENSP00000348215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31278	Q5TCZ1	NM_014631.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369774.4	SH3PXD2A-001	11468	1133aa	ENSP00000358789.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ35 Q5TCZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420222.1	SH3PXD2A-003	3251	1060aa	ENSP00000395781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540321.1	SH3PXD2A-204	3117	1000aa	ENSP00000443663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z9C6 F5GZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538130.1	SH3PXD2A-203	3039	968aa	ENSP00000441514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427662.2	SH3PXD2A-202	1393	369aa	ENSP00000392664.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCK5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315994.6	SH3PXD2A-002	5504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 11,468 bps, Translation length: 1,133 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TCZ1

Version

ENST00000369774.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000050178 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000369774.4 SH3PXD2A-001

Summary