Transcript: ENST00000477757.1 PDLIM1-002

Description

PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:2067]

Gene Synonyms

CLIM1, CLP-36, CLP36, HEL-S-112, hCLIM1

Location

About this transcript

This transcript has 6 exons, is associated with 21388 variant alleles and maps to 363 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329399.6	PDLIM1-001	1452	329aa	ENSP00000360305.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7441	O00151	NM_020992.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477757.1	PDLIM1-002	850	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493949.1	PDLIM1-003	795	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490391.1	PDLIM1-005	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492511.1	PDLIM1-004	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 850 bps,

Version

ENST00000477757.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049509 (version 1)