Transcript: ENST00000371601.4 NPDC1-001

Description

neural proliferation, differentiation and control, 1 [Source:HGNC Symbol;Acc:7899]

Gene Synonyms

CAB, CAB-, CAB-1, CAB1, DKFZp586J0523, NPDC-1

Location

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 4176 variant alleles and maps to 359 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371601.4	NPDC1-001	1494	325aa	ENSP00000360660.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7024	Q9NQX5	NM_015392.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371600.3	NPDC1-002	2187	403aa	ENSP00000360659.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SPY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488145.1	NPDC1-004	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485589.1	NPDC1-005	506	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496498.1	NPDC1-003	383	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472668.1	NPDC1-006	358	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,494 bps, Translation length: 325 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQX5

CCDS

This transcript is a member of the Human CCDS set: CCDS7024

Version

ENST00000371601.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055182 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.