Transcript: ENST00000395534.2 ECM2-003

Description

extracellular matrix protein 2, female organ and adipocyte specific [Source:HGNC Symbol;Acc:3154]

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 7760 variant alleles and maps to 183 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344604.5	ECM2-001	3253	699aa	ENSP00000344758.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6698	B4DPC6 O94769 Q5T9F4	NM_001393.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444490.2	ECM2-201	1999	643aa	ENSP00000393971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56578	O94769 Q5T9F4	NM_001197296.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375540.1	ECM2-002	1606	164aa	ENSP00000364690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9F3 Q5T9F4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395534.2	ECM2-003	612	160aa	ENSP00000378905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9F4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 612 bps, Translation length: 160 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000395534.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053093 (version 1)