Transcript: ENST00000443817.1 CPED1-004

Description

cadherin-like and PC-esterase domain containing 1 [Source:HGNC Symbol;Acc:26159]

Gene Synonyms

C7orf58, FLJ21986

Location

Chromosome 7: 120,716,632-120,776,108 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 1 domain and feature, is associated with 26004 variant alleles and maps to 229 oligo probes.

Gene

This transcript is a product of gene ENSG00000106034.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310396.5	CPED1-001	5340	1026aa	ENSP00000309772.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34739	A4D0V7 E7ENG7 E9PCC8 Q75MM9	NM_024913.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450913.2	CPED1-007	2501	783aa	ENSP00000406122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47690	A4D0V7 E7ENG7 E9PCC8 G5E9U2 Q75MM9	NM_001105533.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428526.1	CPED1-003	2219	549aa	ENSP00000398082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENG7 Q75MM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423795.1	CPED1-005	2189	563aa	ENSP00000415573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCC8 G5E9U2 Q75MM9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443817.1	CPED1-004	1118	334aa	ENSP00000391952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PCC8 Q75MM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000340646.5	CPED1-201	609	202aa	ENSP00000345235.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5MJQ4 Q86SV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520801.1	CPED1-008	553	60aa	ENSP00000428504.1	Nonsense mediated decay		H0YB19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495036.1	CPED1-002	2198	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466055.1	CPED1-006	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521774.1	CPED1-009	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,118 bps, Translation length: 334 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000443817.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346962 (version 1)

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Transcript: ENST00000443817.1 CPED1-004

Summary