Transcript: ENST00000595791.1 MAG-005

Description

myelin associated glycoprotein [Source:HGNC Symbol;Acc:6783]

Gene Synonyms

GMA, S-MAG, SIGLEC-4A, SIGLEC4A

Location

Chromosome 19: 35,783,059-35,790,516 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 3955 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSG00000105695.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392213.3	MAG-001	2390	626aa	ENSP00000376048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12455	M0QZU4 M0R3B9 M0R3I4 P20916	NM_002361.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361922.4	MAG-002	2426	582aa	ENSP00000355234.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12456	M0QZU4 M0R3B9 M0R3I4 P20916 Q15489	NM_080600.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537831.2	MAG-003	2341	601aa	ENSP00000440695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56090	M0QZU4 P20916	NM_001199216.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595791.1	MAG-005	585	158aa	ENSP00000473125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZU4 M0R3B9 M0R3I4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600291.1	MAG-004	559	131aa	ENSP00000470772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597035.1	MAG-006	542	58aa	ENSP00000473245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R3I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593348.1	MAG-007	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000597162.1	MAG-008	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 585 bps, Translation length: 158 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000595791.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000466073 (version 1)

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Transcript: ENST00000595791.1 MAG-005

Summary