Transcript: ENST00000588327.1 FZR1-008

Description

fizzy/cell division cycle 20 related 1 (Drosophila) [Source:HGNC Symbol;Acc:24824]

Gene Synonyms

CDC20C, CDH1, FYR, FZR, FZR2, HCDH, HCDH1, KIAA1242

Location

Chromosome 19: 3,506,375-3,527,058 forward strand.

About this transcript

This transcript has 5 exons, is associated with 10606 variant alleles and maps to 175 oligo probes.

Gene

This transcript is a product of gene ENSG00000105325.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395095.3	FZR1-002	1491	496aa	ENSP00000378529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45916	Q9UM11	NM_001136198.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441788.2	FZR1-001	5212	493aa	ENSP00000410369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12109	Q9UM11	NM_016263.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313639.8	FZR1-003	1215	404aa	ENSP00000321800.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45917	Q9UM11	NM_001136197.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591290.1	FZR1-004	1331	361aa	ENSP00000467967.1	Nonsense mediated decay		K7EQT1	-	-
ENST00000588327.1	FZR1-008	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588084.1	FZR1-005	671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586212.1	FZR1-006	623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592214.1	FZR1-007	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 675 bps,

Version

ENST00000588327.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452936 (version 1)

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Transcript: ENST00000588327.1 FZR1-008

Summary