Transcript: ENST00000590841.1 OLFM2-002

Description

olfactomedin 2 [Source:HGNC Symbol;Acc:17189]

Gene Synonyms

NOE2, NOELIN2, NOELIN2_V1, OlfC

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 2136 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264833.4	OLFM2-001	2019	454aa	ENSP00000264833.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12221	K7EIS8 O95897	NM_058164.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590841.1	OLFM2-002	1665	376aa	ENSP00000464877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593091.1	OLFM2-005	1226	335aa	ENSP00000465809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKW2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592448.1	OLFM2-003	713	78aa	ENSP00000466018.1	Nonsense mediated decay		K7ELC6	-	-
ENST00000590410.1	OLFM2-004	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,665 bps, Translation length: 376 residues

Version

ENST00000590841.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451120 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.