Transcript: ENST00000593942.1 PEX11G-002

Description

peroxisomal biogenesis factor 11 gamma [Source:HGNC Symbol;Acc:20208]

Gene Synonyms

PEX11C

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 10071 variant alleles and maps to 258 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221480.1	PEX11G-001	1062	241aa	ENSP00000221480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12178	Q96HA9	NM_080662.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593942.1	PEX11G-002	1345	171aa	ENSP00000472216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96HA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593547.1	PEX11G-004	806	168aa	ENSP00000472956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000599519.1	PEX11G-003	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,345 bps, Translation length: 171 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HA9

Version

ENST00000593942.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458966 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.