Transcript: ENST00000399334.3 CEP152-004

Description

centrosomal protein 152kDa [Source:HGNC Symbol;Acc:29298]

Gene Synonyms

KIAA0912, MCPH4, MCPH9, SCKL5

Location

Chromosome 15: 49,030,348-49,103,184 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 20 domains and features, is associated with 29913 variant alleles and maps to 651 oligo probes.

Gene

This transcript is a product of gene ENSG00000103995.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380950.2	CEP152-001	5635	1710aa	ENSP00000370337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58361	H0YN91 O94986	NM_014985.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399334.3	CEP152-004	5097	1654aa	ENSP00000382271.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42033	H0YN91 O94986	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325747.5	CEP152-003	4986	1275aa	ENSP00000321000.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN91 O94986	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558591.1	CEP152-007	588	68aa	ENSP00000453914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN91	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560322.1	CEP152-002	1947	584aa	ENSP00000453440.1	Non stop decay		H0YN91	-	-
ENST00000561245.1	CEP152-010	577	64aa	ENSP00000453591.1	Nonsense mediated decay		H0YMG1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559398.1	CEP152-009	591	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558337.1	CEP152-008	424	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559444.1	CEP152-006	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559630.1	CEP152-005	253	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 5,097 bps, Translation length: 1,654 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O94986

CCDS

This transcript is a member of the Human CCDS set: CCDS42033

Version

ENST00000399334.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000417366 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000399334.3 CEP152-004

Summary