Transcript: ENST00000563489.1 SLC7A5-003

Description

solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:HGNC Symbol;Acc:11063]

Gene Synonyms

4F2LC, CD98, CD98LC, D16S469E, E16, LAT1, MPE16, hLAT1

Location

About this transcript

This transcript has 3 exons, is associated with 2492 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261622.4	SLC7A5-001	4537	507aa	ENSP00000261622.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10964	Q01650	NM_003486.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565644.1	SLC7A5-002	3983	241aa	ENSP00000454323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q01650	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563489.1	SLC7A5-003	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 780 bps,

Version

ENST00000563489.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000431894 (version 1)