Transcript: ENST00000564057.1 COTL1-002

Description

coactosin-like 1 (Dictyostelium) [Source:HGNC Symbol;Acc:18304]

Gene Synonyms

CLP

Location

Chromosome 16: 84,599,265-84,651,665 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 28988 variant alleles and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSG00000103187.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262428.4	COTL1-001	1843	142aa	ENSP00000262428.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10947	H3BT58 Q14019	NM_021149.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564057.1	COTL1-002	1677	73aa	ENSP00000457033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567278.1	COTL1-003	5330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567786.1	COTL1-007	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561707.1	COTL1-006	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564662.1	COTL1-005	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,677 bps, Translation length: 73 residues

Version

ENST00000564057.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433431 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000564057.1 COTL1-002

Summary