Transcript: ENST00000571392.1 DHODH-001

Description

dihydroorotate dehydrogenase (quinone) [Source:HGNC Symbol;Acc:2867]

Gene Synonyms

DHOdehase, POADS, URA1

Location

Chromosome 16: 72,049,522-72,058,411 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4737 variant alleles and maps to 297 oligo probes.

Gene

This transcript is a product of gene ENSG00000102967.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219240.4	DHODH-201	2065	395aa	ENSP00000219240.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42192	J3QRQ3 Q02127	NM_001361.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572887.1	DHODH-002	2209	393aa	ENSP00000461848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3NI32 J3QRQ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576145.1	DHODH-003	843	144aa	ENSP00000464333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRQ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574309.1	DHODH-009	607	193aa	ENSP00000460966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRQ3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571288.2	DHODH-004	839	76aa	ENSP00000464249.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000573922.1	DHODH-008	427	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571392.1	DHODH-001	2165	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573843.1	DHODH-005	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572003.1	DHODH-006	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,165 bps,

Version

ENST00000571392.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440471 (version 2)

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Transcript: ENST00000571392.1 DHODH-001

Summary