Transcript: ENST00000542818.1 ZNF516-005

Description

zinc finger protein 516 [Source:HGNC Symbol;Acc:28990]

Gene Synonyms

HsT287, KIAA0222

Location

Chromosome 18: 74,074,226-74,090,868 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 8042 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000101493.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000443185.2	ZNF516-201	8619	1163aa	ENSP00000394757.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H2K2 Q92618	NM_014643.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532857.1	ZNF516-002	482	75aa	ENSP00000446211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H2K2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542818.1	ZNF516-005	346	25aa	ENSP00000445902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524431.2	ZNF516-001	8119	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000529449.2	ZNF516-003	2327	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000543743.1	ZNF516-006	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 346 bps, Translation length: 25 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000542818.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397853 (version 1)

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Transcript: ENST00000542818.1 ZNF516-005

Summary