Transcript: ENST00000552677.1 BRMS1L-002

Description

breast cancer metastasis-suppressor 1-like [Source:HGNC Symbol;Acc:20512]

Gene Synonyms

BRMS1, FLJ39177, MGC11296

Location

Chromosome 14: 36,295,647-36,340,066 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 3 domains and features, is associated with 18098 variant alleles and maps to 466 oligo probes.

Gene

This transcript is a product of gene ENSG00000100916.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216807.7	BRMS1L-001	2657	323aa	ENSP00000216807.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32066	B2RD65 B3KU43 Q5PSV4	NM_032352.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543183.1	BRMS1L-201	1544	275aa	ENSP00000443781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2RD65 B3KU43	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551774.1	BRMS1L-006	1201	215aa	ENSP00000446826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000552677.1	BRMS1L-002	1544	48aa	ENSP00000448615.1	Nonsense mediated decay		F8VRR2	-	-
ENST00000547420.1	BRMS1L-004	650	48aa	ENSP00000447022.1	Nonsense mediated decay		F8VRR2	-	-
ENST00000548758.1	BRMS1L-003	1077	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552849.1	BRMS1L-005	290	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 2, Transcript length: 1,544 bps, Translation length: 48 residues

Version

ENST00000552677.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409602 (version 1)

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Transcript: ENST00000552677.1 BRMS1L-002

Summary