Transcript: ENST00000555761.1 SNW1-003

Description

SNW domain containing 1 [Source:HGNC Symbol;Acc:16696]

Gene Synonyms

Bx42, NCOA-62, NCoA-62, PRPF45, Prp45, SKIIP, SKIP

Location

Chromosome 14: 78,184,296-78,227,499 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 19172 variant alleles and maps to 465 oligo probes.

Gene

This transcript is a product of gene ENSG00000100603.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261531.7	SNW1-001	2163	536aa	ENSP00000261531.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9867	G3V4X8 Q13573	NM_012245.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555761.1	SNW1-003	1855	571aa	ENSP00000451129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3A4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554775.1	SNW1-004	1687	374aa	ENSP00000452059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554324.1	SNW1-007	584	185aa	ENSP00000452473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5R3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556428.1	SNW1-002	1966	47aa	ENSP00000451741.1	Nonsense mediated decay		G3V4E0	-	-
ENST00000557663.1	SNW1-006	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553565.1	SNW1-008	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,855 bps, Translation length: 571 residues

Version

ENST00000555761.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413916 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000555761.1 SNW1-003

Summary