Transcript: ENST00000557317.1 CGRRF1-004

Description

cell growth regulator with ring finger domain 1 [Source:HGNC Symbol;Acc:15528]

Gene Synonyms

CGR19, RNF197

Location

Chromosome 14: 54,976,624-54,997,716 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 9086 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSG00000100532.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216420.7	CGRRF1-001	1597	332aa	ENSP00000216420.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9719	Q99675	NM_006568.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557317.1	CGRRF1-004	668	204aa	ENSP00000450430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V229	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556172.1	CGRRF1-005	605	73aa	ENSP00000470702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZQ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554791.1	CGRRF1-009	719	91aa	ENSP00000451532.1	Nonsense mediated decay		G3V412	-	-
ENST00000557755.1	CGRRF1-006	622	44aa	ENSP00000450728.1	Nonsense mediated decay		G3V2K9	-	-
ENST00000557512.1	CGRRF1-007	901	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557184.1	CGRRF1-008	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557429.1	CGRRF1-003	2309	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556216.1	CGRRF1-002	1827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 668 bps, Translation length: 204 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000557317.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411180 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000557317.1 CGRRF1-004

Summary