Description
cochlin [Source:HGNC Symbol;Acc:2180]
Gene Synonyms
COCH-5B2, COCH5B2, DFNA31, DFNA9
Location
Chromosome 14: 31,349,791-31,359,822 forward strand.
About this transcript
This transcript has 6 exons, is annotated with 18 domains and features, is associated with 4912 variant alleles and maps to 346 oligo probes.
Gene
This transcript is a product of gene ENSG00000100473.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000396618.3 | COCH-005 | 2536 | 550aa | ENSP00000379862.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9640 | G3V4C4 G3V5G6 O43405 | NM_004086.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000460581.2 | COCH-007 | 2688 | 438aa | ENSP00000451713.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4C4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000216361.4 | COCH-006 | 2397 | 550aa | ENSP00000216361.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9640 | G3V4C4 G3V5G6 O43405 | NM_001135058.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000382493.4 | COCH-201 | 2131 | 401aa | ENSP00000371933.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EN67 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000468826.2 | COCH-008 | 2129 | 434aa | ENSP00000452284.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EN67 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000475087.1 | COCH-003 | 1997 | 494aa | ENSP00000451528.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5G6 Q96IU6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000555881.1 | COCH-011 | 782 | 202aa | ENSP00000452569.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5X3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556908.1 | COCH-012 | 775 | 193aa | ENSP00000452541.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5V4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557065.1 | COCH-014 | 654 | 55aa | ENSP00000451629.1 | Nonsense mediated decay | H0YJJ0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000553772.1 | COCH-010 | 554 | 80aa | ENSP00000452343.1 | Nonsense mediated decay | G3V5G6 | - | - | |
| ENST00000553833.1 | COCH-013 | 635 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000555117.1 | COCH-009 | 619 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |