Transcript: ENST00000411915.1 TXN2-003

Description

thioredoxin 2 [Source:HGNC Symbol;Acc:17772]

Gene Synonyms

MT-TRX, MTRX, TRX2

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 6169 variant alleles and maps to 189 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216185.2	TXN2-001	1736	166aa	ENSP00000216185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13928	B4DX69 M0QXH0 Q99757	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416967.1	TXN2-002	1280	64aa	ENSP00000469160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXH0	NM_012473.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403313.1	TXN2-005	912	166aa	ENSP00000385393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13928	B4DX69 M0QXH0 Q99757	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411915.1	TXN2-003	570	146aa	ENSP00000409407.1	Nonsense mediated decay		F8WDN2	-	-
ENST00000487725.1	TXN2-004	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 570 bps, Translation length: 146 residues

Version

ENST00000411915.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319018 (version 1)