Transcript: ENST00000359486.3 TCF20-001

Description

transcription factor 20 (AR1) [Source:HGNC Symbol;Acc:11631]

Gene Synonyms

AR1, KIAA0292, SPBP, TCF-20

Location

About this transcript

This transcript has 5 exons, is annotated with 21 domains and features, is associated with 28020 variant alleles and maps to 480 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359486.3	TCF20-001	7410	1960aa	ENSP00000352463.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14033	I3L1M7 Q9UGU0	NM_005650.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335626.4	TCF20-002	6237	1938aa	ENSP00000335561.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14032	I3L1M7 Q9UGU0	NM_181492.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404876.1	TCF20-003	1058	250aa	ENSP00000385531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9JX13	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515426.1	TCF20-004	633	153aa	ENSP00000458948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1M7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 7,410 bps, Translation length: 1,960 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGU0

CCDS

This transcript is a member of the Human CCDS set: CCDS14033

Version

ENST00000359486.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320531 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.