Transcript: ENST00000601724.1 MARCH2-006

Description

membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:28038]

Gene Synonyms

HSPC240, MARCH-II, RNF172

Location

Chromosome 19: 8,478,179-8,491,557 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 7023 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSG00000099785.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000602117.1	MARCH2-001	1667	246aa	ENSP00000471536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12202	M0R0S4 M0R138 M0R1P2 Q9P0N8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393944.1	MARCH2-202	1647	246aa	ENSP00000377518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12202	M0R0S4 M0R138 M0R1P2 Q9P0N8	NM_016496.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000215555.2	MARCH2-201	1376	246aa	ENSP00000215555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12202	M0R0S4 M0R138 M0R1P2 Q9P0N8	NM_001005415.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381035.4	MARCH2-002	1192	176aa	ENSP00000370423.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32894	M0R0S4 M0R138 M0R1P2 Q9P0N8	NM_001005416.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595213.1	MARCH2-004	865	56aa	ENSP00000471411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0S4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601283.1	MARCH2-005	747	40aa	ENSP00000469386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXU4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595142.1	MARCH2-003	690	78aa	ENSP00000472027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0S4 M0R1P2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601724.1	MARCH2-006	485	80aa	ENSP00000471619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0S4 M0R138 M0R1P2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594796.1	MARCH2-007	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 485 bps, Translation length: 80 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000601724.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000461129 (version 1)

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Transcript: ENST00000601724.1 MARCH2-006

Summary