Transcript: ENST00000371447.3 PDE6C-001

Description

phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:HGNC Symbol;Acc:8787]

Gene Synonyms

ACHM5, COD4, PDEA2

Location

About this transcript

This transcript has 22 exons, is annotated with 26 domains and features, is associated with 23884 variant alleles and maps to 685 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371447.3	PDE6C-001	3307	858aa	ENSP00000360502.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7429	P51160	NM_006204.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475427.2	PDE6C-002	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,307 bps, Translation length: 858 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51160

CCDS

This transcript is a member of the Human CCDS set: CCDS7429

Version

ENST00000371447.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049437 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.