Transcript: ENST00000491990.1 NUP188-013

Description

nucleoporin 188kDa [Source:HGNC Symbol;Acc:17859]

Gene Synonyms

KIAA0169, hNup188

Location

Chromosome 9: 131,709,986-131,720,333 forward strand.

About this transcript

This transcript has 6 exons, is associated with 5468 variant alleles and maps to 213 oligo probes.

Gene

This transcript is a product of gene ENSG00000095319.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372577.2	NUP188-001	5689	1749aa	ENSP00000361658.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35156	Q5SRE5	NM_015354.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550219.1	NUP188-010	886	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467044.1	NUP188-011	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491502.1	NUP188-005	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465344.1	NUP188-008	400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491990.1	NUP188-013	381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477069.1	NUP188-002	2941	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487952.1	NUP188-012	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495726.1	NUP188-003	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464729.1	NUP188-004	408	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485158.1	NUP188-006	392	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 381 bps,

Version

ENST00000491990.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317341 (version 2)

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Transcript: ENST00000491990.1 NUP188-013

Summary