Transcript: ENST00000378961.4 CHGB-001

Description

chromogranin B (secretogranin 1) [Source:HGNC Symbol;Acc:1930]

Gene Synonyms

SCG1

Location

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 6704 variant alleles and maps to 396 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378961.4	CHGB-001	2550	677aa	ENSP00000368244.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13092	P05060	NM_001819.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455042.1	CHGB-002	1129	289aa	ENSP00000416643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488832.1	CHGB-003	2030	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,550 bps, Translation length: 677 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05060

CCDS

This transcript is a member of the Human CCDS set: CCDS13092

Version

ENST00000378961.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077897 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.