Transcript: ENST00000518335.1 ADAMTS2-004

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 2 [Source:HGNC Symbol;Acc:218]

Gene Synonyms

ADAM-TS2, ADAMTS-2, ADAMTS-3, NPI, PC I-NP, PCI-NP, PCINP, PCPNI, PNPI, hPCPNI

Location

Chromosome 5: 178,548,212-178,549,768 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 957 variant alleles and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000087116.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251582.7	ADAMTS2-001	6754	1211aa	ENSP00000251582.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4444	O95450	NM_014244.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274609.5	ADAMTS2-002	2044	566aa	ENSP00000274609.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34311	O95450	NM_021599.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518335.1	ADAMTS2-004	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522937.1	ADAMTS2-005	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523450.1	ADAMTS2-003	322	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 664 bps,

Version

ENST00000518335.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374455 (version 1)

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Transcript: ENST00000518335.1 ADAMTS2-004

Summary