Transcript: ENST00000563491.1 HSD17B2-003

Description

hydroxysteroid (17-beta) dehydrogenase 2 [Source:HGNC Symbol;Acc:5211]

Gene Synonyms

EDH17B2, HSD17, SDR9C2

Location

Chromosome 16: 82,068,609-82,104,675 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 19518 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSG00000086696.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000199936.4	HSD17B2-001	1455	387aa	ENSP00000199936.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10936	H3BQY3 H3BS44 P37059	NM_002153.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569351.2	HSD17B2-006	1302	200aa	ENSP00000454931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNN1 H3BQY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568090.1	HSD17B2-007	865	220aa	ENSP00000456529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQY3 H3BS44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566838.1	HSD17B2-005	603	188aa	ENSP00000456471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQY3 H3BRZ6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000566213.1	HSD17B2-004	551	133aa	ENSP00000457943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV42	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563491.1	HSD17B2-003	487	66aa	ENSP00000455992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 487 bps, Translation length: 66 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000563491.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432558 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000563491.1 HSD17B2-003

Summary