Transcript: ENST00000488135.2 BCORL1-005

Description

BCL6 corepressor-like 1 [Source:HGNC Symbol;Acc:25657]

Gene Synonyms

BCoR-L1, CXorf10, FLJ11362

Location

Chromosome X: 129,115,139-129,147,154 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 10244 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000085185.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540052.1	BCORL1-203	7127	1711aa	ENSP00000437775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14616	Q5H9F3 Q9HAM3	NM_021946.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303743.5	BCORL1-201	6934	1785aa	ENSP00000307541.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5H9F3 Q86YA6 Q9HAM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000218147.7	BCORL1-001	6860	1711aa	ENSP00000218147.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14616	Q5H9F3 Q9HAM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359304.2	BCORL1-202	6322	1581aa	ENSP00000352253.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5H9F3 Q9HAM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456822.1	BCORL1-003	5648	1385aa	ENSP00000399483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86YA6 Q9HAM3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000441294.1	BCORL1-004	2221	741aa	ENSP00000416520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000488135.2	BCORL1-005	857	45aa	ENSP00000476643.1	Nonsense mediated decay		-	-	-
ENST00000607874.1	BCORL1-002	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 857 bps, Translation length: 45 residues

Version

ENST00000488135.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000472572 (version 1)

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Transcript: ENST00000488135.2 BCORL1-005

Summary