Transcript: ENST00000480001.1 RARB-007

Description

retinoic acid receptor, beta [Source:HGNC Symbol;Acc:9865]

Gene Synonyms

HAP, MCOPS12, NR1B2, RRB2

Location

Chromosome 3: 25,470,207-25,638,140 forward strand.

About this transcript

This transcript has 7 exons, is associated with 79309 variant alleles and maps to 343 oligo probes.

Gene

This transcript is a product of gene ENSG00000077092.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330688.4	RARB-001	3084	448aa	ENSP00000332296.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2642	F1D8S6 P10826 Q5QHG3	NM_000965.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437042.2	RARB-002	2775	336aa	ENSP00000398840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46775	P10826 Q5QHG3	NM_016152.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458646.1	RARB-004	2590	336aa	ENSP00000391391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46775	P10826 Q5QHG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404969.1	RARB-201	1368	455aa	ENSP00000385865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSI3 D6RBI3 P10826 Q5QHG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383772.4	RARB-005	1273	402aa	ENSP00000373282.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462272.1	RARB-008	1258	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479097.1	RARB-009	1235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480001.1	RARB-007	1191	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489694.1	RARB-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,191 bps,

Version

ENST00000480001.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340851 (version 1)

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Transcript: ENST00000480001.1 RARB-007

Summary