Transcript: ENST00000537279.1 ACACB-014

Description

acetyl-CoA carboxylase beta [Source:HGNC Symbol;Acc:85]

Gene Synonyms

ACC2, ACCB, HACC275

Location

Chromosome 12: 109,700,827-109,704,746 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1856 variant alleles and maps to 349 oligo probes.

Gene

This transcript is a product of gene ENSG00000076555.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338432.7	ACACB-001	9360	2458aa	ENSP00000341044.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31898	E9PEW7 F5H5C3 O00763	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377848.3	ACACB-201	9247	2458aa	ENSP00000367079.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31898	E9PEW7 F5H5C3 O00763	NM_001093.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377854.5	ACACB-202	9037	2388aa	ENSP00000367085.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEW7 F5H5C3 F8W8T8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543201.1	ACACB-203	3643	858aa	ENSP00000444075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEW7 F6QQI9 H0YGH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544726.1	ACACB-002	678	155aa	ENSP00000474680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3S7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539864.1	ACACB-005	583	143aa	ENSP00000443494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5C3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538526.1	ACACB-004	3654	859aa	ENSP00000443281.1	Nonsense mediated decay		E9PEW7 F6QQI9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543080.1	ACACB-007	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537279.1	ACACB-014	2379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000396233.4	ACACB-012	1305	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537347.1	ACACB-010	1254	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542524.1	ACACB-009	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536440.1	ACACB-013	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546328.1	ACACB-006	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544651.1	ACACB-008	358	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534852.1	ACACB-011	290	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,379 bps,

Version

ENST00000537279.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403090 (version 1)

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Transcript: ENST00000537279.1 ACACB-014

Summary