Transcript: ENST00000570251.1 TIPIN-004

Description

TIMELESS interacting protein [Source:HGNC Symbol;Acc:30750]

Gene Synonyms

FLJ20516

Location

Chromosome 15: 66,641,714-66,679,084 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 17282 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000075131.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261881.4	TIPIN-001	1744	301aa	ENSP00000261881.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10215	G8JLE5 H3BU04 H3BVG9 Q9BVW5	NM_017858.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367709.4	TIPIN-201	1459	200aa	ENSP00000356682.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562124.1	TIPIN-003	1009	294aa	ENSP00000457406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU04 H3BVG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000570251.1	TIPIN-004	685	116aa	ENSP00000458117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BVG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568216.1	TIPIN-005	495	141aa	ENSP00000457172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTH1 H3BVG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566524.1	TIPIN-002	1459	74aa	ENSP00000455656.1	Nonsense mediated decay		H3BQ83	-	-
ENST00000561773.1	TIPIN-006	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 685 bps, Translation length: 116 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000570251.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420720 (version 1)

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Transcript: ENST00000570251.1 TIPIN-004

Summary