Transcript: ENST00000336498.3 ARHGAP10-001

Description

Rho GTPase activating protein 10 [Source:HGNC Symbol;Acc:26099]

Gene Synonyms

FLJ20896, FLJ41791, GRAF2, PS-GAP, PSGAP

Location

Chromosome 4: 148,653,214-148,993,931 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 24 domains and features, is associated with 150456 variant alleles and maps to 636 oligo probes.

Gene

This transcript is a product of gene ENSG00000071205.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336498.3	ARHGAP10-001	3299	786aa	ENSP00000336923.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34075	A1A4S6 Q3KQX3 Q8ND72	NM_024605.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507661.1	ARHGAP10-004	1934	413aa	ENSP00000422358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUW5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414545.2	ARHGAP10-201	1934	384aa	ENSP00000406624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUW5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510076.1	ARHGAP10-007	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506054.1	ARHGAP10-003	8188	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506020.1	ARHGAP10-005	2131	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510379.1	ARHGAP10-002	1559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513548.1	ARHGAP10-006	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,299 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1A4S6

CCDS

This transcript is a member of the Human CCDS set: CCDS34075

Version

ENST00000336498.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000365005 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000336498.3 ARHGAP10-001

Summary