Transcript: ENST00000155858.6 TRPM5-001

Description

transient receptor potential cation channel, subfamily M, member 5 [Source:HGNC Symbol;Acc:14323]

Gene Synonyms

LTRPC5, MTR1

Location

Chromosome 11: 2,425,745-2,444,275 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 11 domains and features, is associated with 11831 variant alleles and maps to 530 oligo probes.

Gene

This transcript is a product of gene ENSG00000070985.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000155858.6	TRPM5-001	3929	1165aa	ENSP00000155858.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31340	Q9NZQ8	NM_014555.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452833.1	TRPM5-201	3932	1167aa	ENSP00000387965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZQ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533881.1	TRPM5-002	3902	1159aa	ENSP00000434383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZQ8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533060.1	TRPM5-003	3562	1173aa	ENSP00000434121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528453.1	TRPM5-004	3535	1166aa	ENSP00000436809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQF7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,929 bps, Translation length: 1,165 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZQ8

CCDS

This transcript is a member of the Human CCDS set: CCDS31340

Version

ENST00000155858.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000027378 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000155858.6 TRPM5-001

Summary