Transcript: ENST00000495759.1 IKBKAP-003

Description

inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein [Source:HGNC Symbol;Acc:5959]

Gene Synonyms

DYS, ELP1, FD, IKAP, IKI3, TOT1

Location

About this transcript

This transcript has 12 exons, is annotated with 4 domains and features, is associated with 10943 variant alleles and maps to 486 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374647.5	IKBKAP-001	5905	1332aa	ENSP00000363779.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6773	B3KMT0 B3KNB2 F5H2T0 O95163 Q4LE38	NM_003640.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537196.1	IKBKAP-201	3823	983aa	ENSP00000439367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KMT0 B3KNB2 F5H2T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495759.1	IKBKAP-003	2840	346aa	ENSP00000433514.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000467959.1	IKBKAP-002	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,840 bps, Translation length: 346 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000495759.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053576 (version 3)