Transcript: ENST00000164133.2 PPP2R5B-001

Description

protein phosphatase 2, regulatory subunit B', beta [Source:HGNC Symbol;Acc:9310]

Gene Synonyms

B56B, FLJ35411, PR61B

Location

About this transcript

This transcript has 14 exons, is annotated with 9 domains and features, is associated with 4521 variant alleles and maps to 635 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000164133.2	PPP2R5B-001	2745	497aa	ENSP00000164133.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8085	E9PNY3 E9PQN5 Q15173	NM_006244.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526559.1	PPP2R5B-006	887	193aa	ENSP00000437088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532850.1	PPP2R5B-004	786	111aa	ENSP00000436136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQN5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413292.1	PPP2R5B-007	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528530.1	PPP2R5B-005	407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,745 bps, Translation length: 497 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15173

CCDS

This transcript is a member of the Human CCDS set: CCDS8085

Version

ENST00000164133.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000385465 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.