Transcript: ENST00000553643.1 ATG2B-005

Description

autophagy related 2B [Source:HGNC Symbol;Acc:20187]

Gene Synonyms

C14orf103, FLJ10242

Location

Chromosome 14: 96,756,907-96,758,275 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 544 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSG00000066739.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359933.4	ATG2B-001	11628	2078aa	ENSP00000353010.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9944	Q96BY7	NM_018036.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261834.5	ATG2B-004	1920	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473234.1	ATG2B-003	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488421.1	ATG2B-002	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554151.1	ATG2B-007	333	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555263.1	ATG2B-006	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553643.1	ATG2B-005	482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 482 bps,

Version

ENST00000553643.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413306 (version 1)

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Transcript: ENST00000553643.1 ATG2B-005

Summary