Transcript: ENST00000374885.1 MSANTD3-003

Description

Myb/SANT-like DNA-binding domain containing 3 [Source:HGNC Symbol;Acc:23370]

Gene Synonyms

C9orf30, MGC17337

Location

Chromosome 9: 103,189,559-103,212,987 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 9603 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSG00000066697.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395067.2	MSANTD3-001	1362	275aa	ENSP00000378506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6749	Q96H12	NM_080655.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374885.1	MSANTD3-003	786	159aa	ENSP00000364020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56579	Q96H12	NM_001198807.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398977.2	MSANTD3-005	780	134aa	ENSP00000415830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000374886.3	MSANTD3-004	710	181aa	ENSP00000364021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489377.1	MSANTD3-002	1991	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 786 bps, Translation length: 159 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96H12

CCDS

This transcript is a member of the Human CCDS set: CCDS56579

Version

ENST00000374885.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053412 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000374885.1 MSANTD3-003

Summary