Transcript: ENST00000448484.1 BCAS1-002

Description

breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:974]

Gene Synonyms

AIBC1, NABC1

Location

Chromosome 20: 52,553,316-52,645,239 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 36682 variant alleles and maps to 329 oligo probes.

Gene

This transcript is a product of gene ENSG00000064787.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395961.3	BCAS1-001	3303	584aa	ENSP00000379290.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13444	O75363	NM_003657.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448484.1	BCAS1-002	6112	476aa	ENSP00000396361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFK2 H0Y542	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000371435.2	BCAS1-003	3020	506aa	ENSP00000360490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAF7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371440.3	BCAS1-201	2183	614aa	ENSP00000360495.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFK2 H0Y542 O75363	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434986.2	BCAS1-203	1337	250aa	ENSP00000409956.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFL4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411563.1	BCAS1-202	1160	164aa	ENSP00000397442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2C4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422805.1	BCAS1-004	882	247aa	ENSP00000399936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 6,112 bps, Translation length: 476 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000448484.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259202 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000448484.1 BCAS1-002

Summary