Transcript: ENST00000492058.1 NCKAP1-004

Description

NCK-associated protein 1 [Source:HGNC Symbol;Acc:7666]

Gene Synonyms

HEM2, KIAA0587, NAP1, NAP125, Nap1, p125Nap1

Location

Chromosome 2: 183,799,130-183,800,231 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 455 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSG00000061676.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360982.2	NCKAP1-002	4989	1134aa	ENSP00000354251.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2288	Q9Y2A7	NM_205842.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361354.4	NCKAP1-001	20347	1128aa	ENSP00000355348.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2287	Q9Y2A7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478449.1	NCKAP1-006	713	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471640.1	NCKAP1-005	306	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495619.1	NCKAP1-008	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492058.1	NCKAP1-004	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493359.1	NCKAP1-007	615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477988.1	NCKAP1-003	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 642 bps,

Version

ENST00000492058.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334526 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000492058.1 NCKAP1-004

Summary