Description
protein tyrosine phosphatase, receptor type, N [Source:HGNC Symbol;Acc:9676]
Gene Synonyms
IA-2, IA-2/PTP, IA2, ICA3, ICA512, R-PTP-N
Location
Chromosome 2: 220,154,371-220,161,063 reverse strand.
About this transcript
This transcript has 5 exons, is annotated with 12 domains and features, is associated with 3289 variant alleles and maps to 404 oligo probes.
Gene
This transcript is a product of gene ENSG00000054356.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000295718.2 | PTPRN-001 | 3784 | 979aa | ENSP00000295718.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2440 | C9J392 C9JCQ0 C9JJL7 Q16849 Q7KZS4 Q96IA0 | NM_002846.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409251.3 | PTPRN-003 | 3622 | 950aa | ENSP00000386638.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56168 | C9J392 C9JCQ0 C9JJL7 Q16849 | NM_001199763.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000423636.2 | PTPRN-021 | 3313 | 889aa | ENSP00000392598.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56167 | C9J392 C9JCQ0 C9JJL7 Q16849 Q7KZS4 Q96IA0 | NM_001199764.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000443981.1 | PTPRN-020 | 1051 | 137aa | ENSP00000396842.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000446182.1 | PTPRN-008 | 606 | 124aa | ENSP00000395379.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J392 C9JCQ0 C9JJL7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440552.1 | PTPRN-011 | 579 | 166aa | ENSP00000408036.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J392 C9JCQ0 C9JR27 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412847.1 | PTPRN-012 | 563 | 125aa | ENSP00000388429.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J392 C9JCQ0 C9JJL7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000442029.1 | PTPRN-013 | 541 | 86aa | ENSP00000396464.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J392 C9JCQ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000451506.1 | PTPRN-009 | 466 | 67aa | ENSP00000397105.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J392 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000606213.1 | PTPRN-005 | 592 | 52aa | ENSP00000475591.1 | Nonsense mediated decay | U3KQ66 | - | - | |
| ENST00000497977.1 | PTPRN-019 | 701 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468454.1 | PTPRN-014 | 504 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462351.1 | PTPRN-006 | 5099 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460801.1 | PTPRN-007 | 2239 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476930.1 | PTPRN-016 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000477819.1 | PTPRN-015 | 579 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489650.1 | PTPRN-018 | 571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486480.1 | PTPRN-017 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484986.1 | PTPRN-010 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |