Transcript: ENST00000552044.1 KITLG-004

Description

KIT ligand [Source:HGNC Symbol;Acc:6343]

Gene Synonyms

FPH2, KL-1, Kitl, MGF, SCF, SF, SHEP7

Location

Chromosome 12: 88,912,610-88,974,246 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 24738 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000049130.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000228280.5	KITLG-002	1642	273aa	ENSP00000228280.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31868	P21583 S4R384 S4R442	NM_000899.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347404.5	KITLG-001	1948	245aa	ENSP00000054216.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31867	P21583 S4R384 S4R442	NM_003994.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357116.4	KITLG-005	565	56aa	ENSP00000474021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R384	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552044.1	KITLG-004	555	24aa	ENSP00000475042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R442	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000378535.4	KITLG-003	5191	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 555 bps, Translation length: 24 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000552044.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406427 (version 2)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000552044.1 KITLG-004

Summary