Transcript: ENST00000513699.1 SLC30A9-002

Description

solute carrier family 30 (zinc transporter), member 9 [Source:HGNC Symbol;Acc:1329]

Gene Synonyms

C4orf1, GAC63, HUEL, ZNT9

Location

About this transcript

This transcript has 19 exons, is annotated with 1 domain and feature, is associated with 39104 variant alleles and maps to 558 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264451.7	SLC30A9-001	6218	568aa	ENSP00000264451.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3465	Q6PML9	NM_006345.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513699.1	SLC30A9-002	2217	119aa	ENSP00000423529.1	Nonsense mediated decay		D6R9M6	-	-
ENST00000509683.1	SLC30A9-005	1078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510460.1	SLC30A9-004	819	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505523.1	SLC30A9-006	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 4, Transcript length: 2,217 bps, Translation length: 119 residues

Version

ENST00000513699.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000360967 (version 1)