Transcript: ENST00000428119.1 RHBDD2-002

Description

rhomboid domain containing 2 [Source:HGNC Symbol;Acc:23082]

Gene Synonyms

NPD007, RHBDL7

Location

Chromosome 7: 75,511,362-75,518,239 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 3419 variant alleles and maps to 300 oligo probes.

Gene

This transcript is a product of gene ENSG00000005486.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000006777.6	RHBDD2-001	1802	364aa	ENSP00000006777.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43602	Q6NTF9	NM_001040456.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000318622.4	RHBDD2-201	1878	223aa	ENSP00000314144.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43603	Q6NTF9	NM_001040457.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428119.1	RHBDD2-002	1274	223aa	ENSP00000391232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43603	Q6NTF9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454791.1	RHBDD2-006	1831	79aa	ENSP00000403507.1	Nonsense mediated decay		Q9UDT1	-	-
ENST00000468304.1	RHBDD2-005	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467406.2	RHBDD2-009	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466232.1	RHBDD2-003	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468644.1	RHBDD2-004	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476218.1	RHBDD2-008	181	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,274 bps, Translation length: 223 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NTF9

CCDS

This transcript is a member of the Human CCDS set: CCDS43603

Version

ENST00000428119.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344181 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000428119.1 RHBDD2-002

Summary