Description
ligase III, DNA, ATP-dependent [Source:HGNC Symbol;Acc:6600]
Gene Synonyms
LIG2
Location
Chromosome 17: 33,310,471-33,318,084 forward strand.
About this transcript
This transcript has 4 exons, is annotated with 2 domains and features, is associated with 3045 variant alleles and maps to 97 oligo probes.
Gene
This transcript is a product of gene ENSG00000005156.7 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000378526.4 | LIG3-001 | 3721 | 1009aa | ENSP00000367787.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11284 | B7Z6I3 C4B7Q3 E5KLB5 K7ENR9 K7EQB6 P49916 | NM_013975.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000262327.5 | LIG3-002 | 3055 | 949aa | ENSP00000262327.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11285 | C4B7Q3 E5KLB6 K7ENR9 K7EQB6 P49916 | NM_002311.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000585941.1 | LIG3-005 | 1699 | 545aa | ENSP00000468479.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENR9 K7EQB6 K7ERZ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585740.1 | LIG3-007 | 887 | 185aa | ENSP00000467757.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQB6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592690.1 | LIG3-006 | 722 | 207aa | ENSP00000467063.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENR9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588109.1 | LIG3-009 | 592 | 38aa | ENSP00000466278.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000585370.1 | LIG3-015 | 235 | 36aa | ENSP00000465288.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000586407.1 | LIG3-008 | 815 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000593099.1 | LIG3-003 | 4664 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000590181.1 | LIG3-004 | 1156 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000590630.1 | LIG3-011 | 904 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586435.1 | LIG3-010 | 588 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586058.1 | LIG3-012 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586119.1 | LIG3-014 | 565 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588713.1 | LIG3-013 | 467 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000592244.1 | LIG3-016 | 440 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |