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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ALS2CL ENSG00000178038

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Description

ALS2 C-terminal like [Source:HGNC Symbol;Acc:20605]

Gene Synonyms

DKFZp686I0110, FLJ36525, RN49018

Location

Chromosome 3: 46,710,487-46,735,194 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 10 transcripts (splice variants) and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318962.4	ALS2CL-001	4741	953aa	ENSP00000313670.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2743	G3V0I7 Q60I27	NM_147129.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415953.1	ALS2CL-002	3471	953aa	ENSP00000413223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2743	G3V0I7 Q60I27	NM_001190707.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383742.3	ALS2CL-008	1747	300aa	ENSP00000373248.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43080	Q60I27	NM_182775.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450172.1	ALS2CL-004	6593	479aa	ENSP00000395663.1	Nonsense mediated decay		G3V0I7	-	-
ENST00000431015.1	ALS2CL-003	6563	523aa	ENSP00000416575.1	Nonsense mediated decay		F8WCP1	-	-
ENST00000423707.1	ALS2CL-006	4470	302aa	ENSP00000395749.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000434140.1	ALS2CL-005	3937	535aa	ENSP00000405335.1	Nonsense mediated decay		G5E9N5	-	-
ENST00000486301.1	ALS2CL-007	4431	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498817.1	ALS2CL-009	1065	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473484.1	ALS2CL-010	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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