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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TTC39C ENSG00000168234

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Description

tetratricopeptide repeat domain 39C [Source:HGNC Symbol;Acc:26595]

Gene Synonyms

C18orf17, FLJ33761, HsT2697

Location

Chromosome 18: 21,572,737-21,715,574 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 10 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540918.2	TTC39C-006	4117	276aa	ENSP00000443016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1P2 J3QKX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317571.3	TTC39C-001	2442	583aa	ENSP00000323645.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45839	J3QKX7 Q8N584	NM_001135993.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304621.6	TTC39C-002	2304	522aa	ENSP00000306598.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32804	J3QKX7 Q8N584	NM_153211.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584250.1	TTC39C-004	1048	76aa	ENSP00000464344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58616	Q8N584	NM_001243425.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577185.1	TTC39C-011	533	43aa	ENSP00000463610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579214.1	TTC39C-007	389	67aa	ENSP00000463283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000578150.1	TTC39C-003	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584424.1	TTC39C-005	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584095.1	TTC39C-010	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581394.1	TTC39C-009	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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